Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949601.1_cds_XP_016490418.1_80840
CDS Infomation

[gene=LOC107810185] [db_xref=GeneID:107810185] [protein=protein pleiotropic regulatory locus 1-like] [protein_id=XP_016490418.1] [location=join(73962..74101,74238..74262,74428..74542,75194..75266,75419..75481,76991..77075,77803..77895,79593..79656,79772..79857,79943..80044,80182..80265,82236..82296,82395..82461,82557..82634,82756..82820,82967..83044,83129..83301)] [gbkey=CDS]
Sequence

ATGCCGGGGCCCACGACAATGGAATCAGAAGTTGCAGTGGAACCACAATCCATCAAGAAG
CTCAGCTTCAAATCCCTTAAACGGTCTCTTGACCTCTTTTCCCCTCTCCATGGTCACTTT
CCCCCTCCTGATCCTGAAAGCAAGAAAATTCGAACGAGCTATAAGCTAAATGTTGAGTAC
GGAGGGATAAAAAGCACAGCAGCCCAACCGGTTTCTAATGCCAAAGCGGCTGTGCAGAAT
CAAGCTCAAAATGCTCCTTCTAATGCCCTTGCTCTTCCAGGTCCTGAAAATACAAGGGAC
GAGGGAACCGGAAATGAATTGGCTCTTGGTCCATCCATACCAGCGAAGGGCCCCGCTGAT
GTCAGGTTCCCAGGGAAAAGCAATGCTATTGTTCCTTCTCATGGTTTGTCAGAAAGAAAT
CTGTCAACTGCTGCAATCATGGAAAGAATACCAAGCAAATGGCCTCGCCCGGTATGGCGT
GCTCCCTGGAAAAACTACAGGGTTATCAGTGGCCATTTGGGATGGGTGCGATCAGTCGCG
GTGGATCCTAGTAACACATGGTTTTGTACTGGATCGGCAGATCGCACTATCAAGATATGG
GATTTAGCAAGTGGAAGATTGAAGCTCACTTTAACAGGGCACATTGAACAAGTTCGGGGC
CTTGCTGTTAGCAACAAACACACATACATGTTCTCAGCTGGTGATGATAAGCAAGTTAAG
TGCTGGGACCTGGAACAAAATAAGGTGATCCGCTCCTATCATGGCCACCTCAGTGGTGTT
TATTGCTTGGCTCTTCATCCAACCATTGACATCTTGTTCACTGGGGGTCGTGATTCTGTC
TGTCGGGTTTGGGATATTCGTAGCAAAATGCAAATTCATGCTCTGTCTGGACATGATAAC
ACTGTTTGTTCTGTTTTTACCAGGCCAATGGATCCACAGGTTATAACTGGCTCTCATGAC
AGTACCATTAAGTTCTGGGACCTTAGATATGGTAAGACAATGGCAACCCTCACACATCAC
AAGAAATCTGTTCGAGCTATGGCTCAGCATCCTACGGAGGATTGTTTTGCTTCTGCATCA
GCAGACAACATAAAAAAATTCAACCTTCCAAAAGGAGAATTTATGCATAACATGCTCTCC
CAACAGAAAACCATTGTCAATGCGATGGCGGTCAATGATGACGGTGTAATGGCCACAGGA
GGTGACAATGGAAGCATGTGGTTTTGGGATTGGAGAAGTGGTCACAATTTCCAGCAATCT
CAAACTATTGTTCAACCTGGGTCACTGGACAGTGAAGCTGGTATCTACGCTCTCACCTAT
GATATGACTGGCTCAAGGCTGATCAGTTGTGAAGCTGATAAGACAATCAAGATGTGGAAA
GAAGATGAAACTGCCACACCAGAAACTCATCCTCTTCATTTTAAGCCTCCAAAAGACATT
AGGCGTTTCTAG

Peptide Sequence

PEP ID

XP_016490418.1
PEP Infomation

PREDICTED: protein pleiotropic regulatory locus 1-like [Nicotiana tabacum]
Sequence

MPGPTTMESEVAVEPQSIKKLSFKSLKRSLDLFSPLHGHFPPPDPESKKIRTSYKLNVEY
GGIKSTAAQPVSNAKAAVQNQAQNAPSNALALPGPENTRDEGTGNELALGPSIPAKGPAD
VRFPGKSNAIVPSHGLSERNLSTAAIMERIPSKWPRPVWRAPWKNYRVISGHLGWVRSVA
VDPSNTWFCTGSADRTIKIWDLASGRLKLTLTGHIEQVRGLAVSNKHTYMFSAGDDKQVK
CWDLEQNKVIRSYHGHLSGVYCLALHPTIDILFTGGRDSVCRVWDIRSKMQIHALSGHDN
TVCSVFTRPMDPQVITGSHDSTIKFWDLRYGKTMATLTHHKKSVRAMAQHPTEDCFASAS
ADNIKKFNLPKGEFMHNMLSQQKTIVNAMAVNDDGVMATGGDNGSMWFWDWRSGHNFQQS
QTIVQPGSLDSEAGIYALTYDMTGSRLISCEADKTIKMWKEDETATPETHPLHFKPPKDI
RRF

Transcript Sequence

Gene sequence data has not been registered.